Computing by Observing Bio-systems: The Case of Sticker Systems -- DNA-Based Computation Times -- Computing Beyond the Turing Limit Using the H Systems -- Biomolecular Implementation of Computing Devices with Unbounded Memory -- Characterization of Non-crosshybridizing DNA Oligonucleotides Manufactured In Vitro -- Error Free Self-assembly Using Error Prone Tiles -- On the Computational Complexi…
Conceptual, Formal, and Theoretical Frameworks -- Fugue: An Interactive Immersive Audiovisualisation and Artwork Using an Artificial Immune System -- Clonal Selection Algorithms: A Comparative Case Study Using Effective Mutation Potentials -- Not All Balls Are Round: An Investigation of Alternative Recognition-Region Shapes -- A Generic Framework for Population-Based Algorithms, Implemented on …
Overview -- to Data Mining in Bioinformatics -- Survey of Biodata Analysis from a Data Mining Perspective -- Sequence and Structure Alignment -- AntiClustAl: Multiple Sequence Alignment by Antipole Clustering -- RNA Structure Comparison and Alignment -- Biological Data Mining -- Piecewise Constant Modeling of Sequential Data Using Reversible Jump Markov Chain Monte Carlo -- Gene Mapping by Patt…
Keynotes -- Challenges in Biological Data Integration in the Post-genome Sequence Era -- Curated Databases -- User Applications -- A User-Centric Framework for Accessing Biological Sources and Tools -- BioLog: A Browser Based Collaboration and Resource Navigation Assistant for BioMedical Researchers -- Learning Layouts of Biological Datasets Semi-automatically -- Ontologies -- Factors Affecting…
Part I : NZ – German School of Computational Intelligence at KES2004 -- Basics of Engineering The Intelligent Hybrid Systems - Not Industrial Applications Only -- Basics of Machine Learning by Support Vector Machines -- Supporting Deep Learning in an Open-ended Domain -- Data Driven Fuzzy Modelling with Neural Networks -- Hybrid Computational Intelligence Systems for Real World Applications -…
Introduction: If CiE Did Not Exist, It Would Be Necessary to Invent It -- Computably Enumerable Sets in the Solovay and the Strong Weak Truth Table Degrees -- The Fan Theorem and Uniform Continuity -- Continuous Semantics for Strong Normalization -- A Thread Algebra with Multi-level Strategic Interleaving -- Membrane Computing — Current Results and Future Problems -- How to Compare the Power …
Long Papers -- An Explicit Upper Bound for the Approximation Ratio of the Maximum Gene Regulatory Network Problem -- Autonomous Mobile Robot Control Based on White Blood Cell Chemotaxis -- Beta Binders for Biological Interactions -- Biomimetic in Silico Devices -- Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing -- Graph-Based Modeling of Biological Regulatory Netwo…
Modeling of the Heart - Anatomy Extraction and Description -- Multi-surface Cardiac Modelling, Segmentation, and Tracking -- Analysis of the Interdependencies Among Plaque Development, Vessel Curvature, and Wall Shear Stress in Coronary Arteries -- Automated Segmentation of X-ray Left Ventricular Angiograms Using Multi-View Active Appearance Models and Dynamic Programming -- SPASM: Segmenta…
Invited Lectures -- ?P Systems and Typed ?-Calculus -- P Automata -- Asynchronous P Systems and P Systems Working in the Sequential Mode -- Evolution and Oscillation in P Systems: Applications to Biological Phenomena -- An Approach to Computational Complexity in Membrane Computing -- LMNtal: A Language Model with Links and Membranes -- Regular Presentations -- Executable Specifications of P Sys…
Invited Papers -- Differential Gene Expression in the Auditory System -- Searching for Non-coding RNA -- Cyberinfrastructure for PathoSystems Biology -- Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites -- Full Papers -- Perturbing Thermodynamically Unfeasible Metabolic Networks -- Protein Cellular Localization with Multic…