Probabilistic Modeling -- A Leisurely Look at Statistical Inference -- to Learning Bayesian Networks from Data -- A Casual View of Multi-Layer Perceptrons as Probability Models -- Bioinformatics -- to Statistical Phylogenetics -- Detecting Recombination in DNA Sequence Alignments -- RNA-Based Phylogenetic Methods -- Statistical Methods in Microarray Gene Expression Data Analysis -- Inferring Ge…
Introduction: Proteomics and Protein-Protein Interactions: Biology, Chemistry, Bioinformatics, and Drug Design -- Yeast Two-Hybrid Protein-Protein Interaction Networks -- The Use of Mass Spectrometry in Studying Protein-Protein Interaction -- Molecular Recognition in the Immune System -- Computational Methods for Predicting Protein-Protein Interactions -- Protein-Protein Docking Methods -- Ther…
Principles -- Models of Systems -- The Modeling Process -- Qualitative Model Formulation -- Quantitative Model Formulation: I -- Quantitative Model Formulation: II -- Numerical Techniques -- Parameter Estimation -- Model Validation -- Model Analysis: Uncertainty and Behavior -- Stochastic Models -- Applications -- Photosynthesis and Plant Growth -- Hormonal Control in Mammals -- Populations and…
Overview -- Analytical Methods for Metabolome Sciences -- Development and Application of Capillary Electrophoresis-Mass Spectrometry Methods to Metabolomics -- Application of Electrospray Ionization Mass Spectrometry for Metabolomics -- High-Performance Liquid Chromatography and Liquid Chromatography/Mass Spectrometry Analyses of Metabolites in Microorganisms -- Metabolome Profiling of Human Ur…
Towards Integrative Functional Genomics Using Yeast as a Reference Model -- Metabolomics for the Assessment of Functional Diversity and Quality Traits in Plants -- Metabolomics: A New Approach Towards Identifying Biomarkers and Therapeutic Targets in CNS Disorders -- Comparative Metabolome Profiling Using Two Dimensional Thin Layer Chromatography (2DTLC) -- Capillary Electrophoresis and Its App…
Intelligent Techniques and Computational Intelligence -- Neuro-Fuzzy based Intelligent Hybrid Systems for Fault Diagnosis -- Neuro-Fuzzy Integration in Intelligent Hybrid Systems -- Fuzzy Rules Extraction from ANNs -- Integration of Explicit and Implicit Knowledge in Intelligent Hybrid Systems -- Practical Implementation Aspects Regarding Real-World Applications of Intelligent Hybrid Systems (N…
Foundational Topics in Medical Informatics -- Knowledge Management, Data Mining, and Text Mining in Medical Informatics -- Mapping Medical Informatics Research -- Bioinformatics Challenges and Opportunities -- Managing Information Security and Privacy in Healthcare Data Mining -- Ethical and Social Challenges of Electronic Health Information -- Information and Knowledge Management -- Medical Co…
Accessible Protein Interaction Data for Network Modeling. Structure of the Information and Available Repositories -- Early Systems Biology and Prebiotic Networks -- Virtualization in Systems Biology: Metamodels and Modeling Languages for Semantic Data Integration -- Genome Size and Numbers of Biological Functions -- Operational Patterns in Beta-Binders -- Discrete Event Multi-level Models for S…
to XML for Bioinformatics -- Fundamentals of XML and BSML -- DTDs for Bioinformatics -- XML Schemas for Bioinformatics -- Parsing NCBI XML in Perl -- The Distributed Annotation System (DAS) -- Parsing DAS Data with SAX -- Parsing DAS Data with JDOM -- Web Services for Bioinformatics.XML, or Extensible Markup Language, is rapidly becoming a critical tool in bioinformatics and biological data exc…
DNA: The Molecule of Life -- Theoretical Computer Science: A Primer -- Models of Molecular Computation -- Complexity Issues -- Physical Implementations -- Cellular Computing.This book provides a broad overview of the entire field of DNA computation, tracing its history and development. It contains detailed descriptions of all major theoretical models and experimental results to date, which are …