Preface -- A. Friedman: Introduction to Neurons -- D. Terman: An Introduction to Dynamical Systems and Neuronal Dynamics -- B. Ermentrout: Neural Oscillators -- A. Borisyuk: Physiology and Mathematical Modeling of the Auditory System.This volume introduces some basic theories on computational neuroscience. Chapter 1 is a brief introduction to neurons, tailored to the subsequent chapters. Chapte…
(Semi-) Plenary Presentations -- Classification and Data Analysis: Classification; Data Analysis -- Applications -- Archaeology; Astronomy; Bio-Sciences; Electronic Data and Web; Finance and Insurance; Library Science and Linguistics; Macro-Economics; Marketing; Music Science; Quality Assurance -- Contest: Social Milieus in Dortmund.
Computing by Observing Bio-systems: The Case of Sticker Systems -- DNA-Based Computation Times -- Computing Beyond the Turing Limit Using the H Systems -- Biomolecular Implementation of Computing Devices with Unbounded Memory -- Characterization of Non-crosshybridizing DNA Oligonucleotides Manufactured In Vitro -- Error Free Self-assembly Using Error Prone Tiles -- On the Computational Complexi…
Keynotes -- Challenges in Biological Data Integration in the Post-genome Sequence Era -- Curated Databases -- User Applications -- A User-Centric Framework for Accessing Biological Sources and Tools -- BioLog: A Browser Based Collaboration and Resource Navigation Assistant for BioMedical Researchers -- Learning Layouts of Biological Datasets Semi-automatically -- Ontologies -- Factors Affecting…
Long Papers -- An Explicit Upper Bound for the Approximation Ratio of the Maximum Gene Regulatory Network Problem -- Autonomous Mobile Robot Control Based on White Blood Cell Chemotaxis -- Beta Binders for Biological Interactions -- Biomimetic in Silico Devices -- Building and Analysing an Integrative Model of HIV-1 RNA Alternative Splicing -- Graph-Based Modeling of Biological Regulatory Netwo…
Modeling of the Heart - Anatomy Extraction and Description -- Multi-surface Cardiac Modelling, Segmentation, and Tracking -- Analysis of the Interdependencies Among Plaque Development, Vessel Curvature, and Wall Shear Stress in Coronary Arteries -- Automated Segmentation of X-ray Left Ventricular Angiograms Using Multi-View Active Appearance Models and Dynamic Programming -- SPASM: Segmenta…
Invited Papers -- Differential Gene Expression in the Auditory System -- Searching for Non-coding RNA -- Cyberinfrastructure for PathoSystems Biology -- Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites -- Full Papers -- Perturbing Thermodynamically Unfeasible Metabolic Networks -- Protein Cellular Localization with Multic…
Principles -- Models of Systems -- The Modeling Process -- Qualitative Model Formulation -- Quantitative Model Formulation: I -- Quantitative Model Formulation: II -- Numerical Techniques -- Parameter Estimation -- Model Validation -- Model Analysis: Uncertainty and Behavior -- Stochastic Models -- Applications -- Photosynthesis and Plant Growth -- Hormonal Control in Mammals -- Populations and…
Overview -- Analytical Methods for Metabolome Sciences -- Development and Application of Capillary Electrophoresis-Mass Spectrometry Methods to Metabolomics -- Application of Electrospray Ionization Mass Spectrometry for Metabolomics -- High-Performance Liquid Chromatography and Liquid Chromatography/Mass Spectrometry Analyses of Metabolites in Microorganisms -- Metabolome Profiling of Human Ur…
Optical Microscopy for Cell Imaging -- to Transmission and Scanning Electron Microscopy -- Potential and Limitation of Cytochemistry -- Cryotechniques for Electron Microscopy: A Minireview -- Cell Membrane Specializations as Revealed by the Freeze-Fracture Technique -- Imaging, Measuring and Manipulating Biological Matter from the Millimeter to Nanometer Scale -- Inside the Small Length and Ene…